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  5. Aspi01Gene17691.t1

Aspi01Gene17691.t1 (Aspi01Gene17691)


Aliases : Aspi01Gene17691

Description : SMARCC component *(SWI3) of chromatin remodeling complex & original description: none


Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene17691.t1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G21700 CHB4, SWI3C, ATSWI3C SWITCH/sucrose nonfermenting 3C 0.02 OrthoFinder output from all 47 species
AT4G34430 CHB3, ATSWI3D DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Cre08.g364050 CHB3, ATSWI3D Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
LOC_Os04g01970.1 CHB3, ATSWI3D,... component BAF255/170 of chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
Pir_g01373 CHB3, ATSWI3D SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006350 CHB3, ATSWI3D SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Sam_g10332 No alias SMARCC component *(SWI3) of chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Zm00001e012143_P002 CHB3, ATSWI3D,... component BAF255/170 of chromatin remodeling complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007526 SWIRM 228 313
No external refs found!