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  5. Aspi01Gene17557.t1

Aspi01Gene17557.t1 (Aspi01Gene17557)


Aliases : Aspi01Gene17557

Description : substrate adaptor *(NRL) of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0000772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene17557.t1

Target Alias Description ECC score Gene Family Method Actions
Als_g09480 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Als_g53271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G068600.1 Ceric.08G068600 not classified & original description: pacid=50637702... 0.02 OrthoFinder output from all 47 species
Ceric.21G036600.1 Ceric.21G036600 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Ceric.31G041900.1 Ceric.31G041900 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os12g41910.2 LOC_Os12g41910 BTB/POZ domain-containing protein At1g30440... 0.04 OrthoFinder output from all 47 species
Lfl_g06649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009652 No alias not classified & original description: CDS=136-2424 0.06 OrthoFinder output from all 47 species
Sam_g19593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g090070.3.1 Solyc02g090070 BTB/POZ domain-containing protein At5g66560... 0.03 OrthoFinder output from all 47 species
Spa_g05885 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Spa_g39042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005028_P001 Zm00001e005028 BTB/POZ domain-containing protein At1g30440... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 220 237
IPR000210 BTB/POZ_dom 326 415
IPR027356 NPH3_dom 513 779
IPR005162 Retrotrans_gag_dom 24 119
No external refs found!