Solyc01g058540.3.1 (Solyc01g058540.3)


Aliases : Solyc01g058540.3

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense. WRKY DNA-binding protein 48 (WRKY48)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g058540.3.1
Cluster HCCA cluster: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT5G13080 WRKY75, ATWRKY75 WRKY DNA-binding protein 75 0.02 Gene family
GSVIVT01022067001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os01g43650 Os01g0626400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os05g40060 Os05g0478400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os11g02470 Os11g0116600 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc02g088345.1.1 Solyc02g088345.1 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Solyc02g094270.2.1 Solyc02g094270.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc08g081630.2.1 Solyc08g081630.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d002452 GRMZM2G024898 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d005622 GRMZM2G163418 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d038451 GRMZM2G169966 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d043474 GRMZM2G141299 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d050247 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d052357 GRMZM2G063216 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d053369 GRMZM2G038158 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 158 215
No external refs found!