Solyc01g057830.3.1 (Solyc01g057830.3)


Aliases : Solyc01g057830.3

Description : 29.2.1.1.3.1.1 protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1 ribosomal protein S1 (RPS1)


Gene families : OG_01_0006378 (Gene family) Phylogenetic Tree(s): OG0006378_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g057830.3.1
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT5G30510 RPS1, ARRPS1 ribosomal protein S1 0.2 Gene family
Cpa|evm.model.tig00000241.13 No alias 29.2.1.1.3.1.1 protein.synthesis.ribosomal... 0.03 Gene family
Cre09.g394750 No alias 29.2.1.1.3.1.1 protein.synthesis.ribosomal... 0.12 Gene family
GSVIVT01034940001 No alias 29.2.1.1.3.1.1 protein.synthesis.ribosomal... 0.21 Gene family
LOC_Os03g20100 Os03g0315800 29.2.1.1.3.1.1 protein.synthesis.ribosomal... 0.12 Gene family
MA_694512g0010 No alias 29.2.1.1.3.1.1 protein.synthesis.ribosomal... 0.05 Gene family
Smo271018 PACid_15420104 29.2.1.1.3.1.1 protein.synthesis.ribosomal... 0.06 Gene family
Zm00001d047581 GRMZM5G862107 29.2.1.1.3.1.1 protein.synthesis.ribosomal... 0.15 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003029 S1_domain 184 247
IPR003029 S1_domain 95 167
IPR003029 S1_domain 260 330
No external refs found!