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  5. Solyc01g057780.3.1

Solyc01g057780.3.1 (Solyc01g057780.3)


Aliases : Solyc01g057780.3

Description : 30.5 signalling.G-proteins Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells. VARIEGATED 3 (VAR3)


Gene families : OG_01_0009313 (Gene family) Phylogenetic Tree(s): OG0009313_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g057780.3.1
Cluster HCCA cluster: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g59980 Os01g0815700 30.5 signalling.G-proteins Encodes a 85.9 kDa protein... 0.08 Gene family
Zm00001d012529 GRMZM2G069106 30.5 signalling.G-proteins Encodes a 85.9 kDa protein... 0.13 Gene family
Zm00001d043095 GRMZM2G312244 30.5 signalling.G-proteins Encodes a 85.9 kDa protein... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 263 290
IPR001876 Znf_RanBP2 297 323
No external refs found!