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  5. Aspi01Gene15680.t1

Aspi01Gene15680.t1 (CNGC15, ATCNGC15,...)


Aliases : CNGC15, ATCNGC15, Aspi01Gene15680

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene15680.t1

Target Alias Description ECC score Gene Family Method Actions
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.04 OrthoFinder output from all 47 species
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.03 OrthoFinder output from all 47 species
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.05 OrthoFinder output from all 47 species
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.03 OrthoFinder output from all 47 species
Ala_g24639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33029 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Cba_g13170 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07103 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Dac_g37580 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26407 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g55100.1 DND1, ATCNGC2,... cyclic nucleotide-gated cation channel (CNGC).... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28260.1 CNGC7, ATCNGC7,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
MA_11172g0010 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Pir_g42887 ATCNGC1, CNGC1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Pir_g46569 ATCNGC1, CNGC1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Sam_g36093 No alias cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Solyc05g050350.2.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc05g050380.4.1 ATCNGC13,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Zm00001e012009_P001 DND1, ATCNGC2,... cyclic nucleotide-gated cation channel (CNGC).... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 15 51
IPR000595 cNMP-bd_dom 147 237
No external refs found!