Aspi01Gene15674.t1 (PUB26, Aspi01Gene15674)

Aliases : PUB26, Aspi01Gene15674

Description : not classified & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene15674.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00130440	CMPG2, ATCMPG2,...	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
AMTR_s00030p00159240	PUB23,...	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00030p00161650	PUB23,...	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00069p00038840	PUB22,...	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00138p00053700	evm_27.TU.AmTr_v1...	U-box domain-containing protein 21 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00149p00072640	PUB22,...	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G66160	CMPG1, ATCMPG1	CYS, MET, PRO, and GLY protein 1	0.03	OrthoFinder output from all 47 species
Aev_g20058	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g28879	PUB26	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g18761	PUB29, ATPUB29	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g20934	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g16814	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.08G030400.1	PUB26, Ceric.08G030400	U-Box-group-III E3 ubiquitin ligase & original...	0.03	OrthoFinder output from all 47 species
Ceric.1Z056500.1	PUB26, Ceric.1Z056500	U-Box-group-III E3 ubiquitin ligase & original...	0.02	OrthoFinder output from all 47 species
Dac_g07515	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g02942	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g46168	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g14116	PUB25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g24916	PUB25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_27794	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os03g13740.1	LOC_Os03g13740	U-box domain-containing protein 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os04g34030.1	PUB23, LOC_Os04g34030	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
LOC_Os06g13870.1	LOC_Os06g13870	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_10430196g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10432179g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10432813g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_1663g0020	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_17715g0010	CMPG1, ATCMPG1	U-box domain-containing protein 20 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_311559g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_33190g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_52661g0010	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_5536318g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_58844g0020	PUB22	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_779502g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
MA_8837995g0010	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp3g22740.1	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Nbi_g04802	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g08921	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12004	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g15131	No alias	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g008100.3.1	Solyc04g008100	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e008167_P001	PUB23, Zm00001e008167	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e015763_P001	Zm00001e015763	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e019173_P001	PUB23, Zm00001e019173	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e022698_P001	PUB26, Zm00001e022698	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e036030_P001	Zm00001e036030	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	5	76

External Links

No external refs found!

Aspi01Gene15674.t1 (PUB26, Aspi01Gene15674)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation