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  5. Aspi01Gene15620.t1

Aspi01Gene15620.t1 (UPL6, Aspi01Gene15620)


Aliases : UPL6, Aspi01Gene15620

Description : not classified & original description: none


Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene15620.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00255750 UPL7,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00213880 UPL6,... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AT3G17205 UPL6 ubiquitin protein ligase 6 0.05 OrthoFinder output from all 47 species
AT3G53090 UPL7 ubiquitin-protein ligase 7 0.07 OrthoFinder output from all 47 species
Aev_g04174 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07294 UPL6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62754 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20441 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38315 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G020700.1 UPL6, Ceric.05G020700 E3 ubiquitin ligase *(UPL6) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z062300.1 UPL7, Ceric.1Z062300 E3 ubiquitin ligase *(UPL6) & original description:... 0.04 OrthoFinder output from all 47 species
Cre06.g280300 UPL6 E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g02012 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15093 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033734001 UPL7 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01034942001 UPL6 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_04194 UPL6 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
LOC_Os05g06690.1 UPL6, LOC_Os05g06690 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Mp3g18370.1 UPL6 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Mp7g02100.1 UPL7 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Ore_g17334 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05330 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g057900.3.1 UPL6, Solyc01g057900 monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Zm00001e031128_P003 UPL6, Zm00001e031128 monomeric E3 ubiquitin ligase (HECT) 0.07 OrthoFinder output from all 47 species
Zm00001e039899_P001 UPL6, Zm00001e039899 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!