Aspi01Gene15575.t1 (ATCSP2, GRP2, CSDP2,...)

Aliases : ATCSP2, GRP2, CSDP2, CSP2, Aspi01Gene15575

Description : cold-responsive mRNA chaperone *(CSD) & original description: none

Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene15575.t1

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000169.17	No alias	External stimuli response.temperature.Csd...	0.01	OrthoFinder output from all 47 species
Cre06.g268600	GRP2B, ATGRP2B, ATCSP4	External stimuli response.temperature.Csd...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010185	ATCSP2, GRP2, CSDP2, CSP2	cold-responsive mRNA chaperone *(CSD) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	177	193
IPR001878	Znf_CCHC	123	138
IPR002059	CSP_DNA-bd	21	85

External Links

No external refs found!