Aspi01Gene15450.t1 (CBF5, AtCBF5, NAP57,...)

Aliases : CBF5, AtCBF5, NAP57, AtNAP57, Aspi01Gene15450

Description : pseudouridine synthase component *(Nap57/CBF5) of H/ACA snoRNP RNA pseudouridylation complex & original description: none

Gene families : OG0004128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004128_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene15450.t1
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00016p00253700	CBF5, AtCBF5,...	RNA processing.RNA modification.pseudouridylation.H/ACA...	0.02	OrthoFinder output from all 47 species
Zm00001e025570_P001	CBF5, AtCBF5,...	pseudouridine synthase component Nap57/CBF5 of H/ACA...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002478	PUA	305	377
IPR032819	TruB_C	235	301
IPR002501	PsdUridine_synth_N	118	234
IPR012960	Dyskerin-like	57	114

External Links

No external refs found!