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  5. Aspi01Gene15329.t1

Aspi01Gene15329.t1 (Aspi01Gene15329)


Aliases : Aspi01Gene15329

Description : RNA chaperone *(RZ1) & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene15329.t1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Aev_g00392 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g33810.1 LOC_Os04g33810 Small RNA-binding protein 11, chloroplastic... 0.06 OrthoFinder output from all 47 species
LOC_Os06g48310.1 LOC_Os06g48310 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Mp2g24130.1 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Ore_g05645 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c12_1830V3.1 ATRZ-1A, Pp3c12_1830 RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 77
IPR001878 Znf_CCHC 122 137
No external refs found!