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  5. Aspi01Gene15226.t1

Aspi01Gene15226.t1 (Aspi01Gene15226)


Aliases : Aspi01Gene15226

Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene15226.t1

Target Alias Description ECC score Gene Family Method Actions
AT3G13228 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G13430 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G53910 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g05181 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene58136.t1 Aspi01Gene58136 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g73123 AIP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G095600.1 Ceric.07G095600 not classified & original description: pacid=50626992... 0.03 OrthoFinder output from all 47 species
Dcu_g39751 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_22124 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.04 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g41520.1 RHC1A, LOC_Os05g41520 Probable E3 ubiquitin-protein ligase RHC1A... 0.05 OrthoFinder output from all 47 species
Ppi_g30226 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Solyc12g008440.1.1 Solyc12g008440 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g15447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 508 550
IPR039525 RNF126-like_zinc-ribbon 318 347
No external refs found!