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  5. Aspi01Gene15027.t1

Aspi01Gene15027.t1 (SCC2, ATSCC2,...)


Aliases : SCC2, ATSCC2, EMB2773, Aspi01Gene15027

Description : adherin *(SCC2) & original description: none


Gene families : OG0005074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005074_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene15027.t1

Target Alias Description ECC score Gene Family Method Actions
AT5G15540 SCC2, ATSCC2, EMB2773 PHD finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g086269 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08111 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g31097 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39401 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011514001 SCC2, ATSCC2, EMB2773 Cell cycle.mitosis and meiosis.sister chromatid... 0.05 OrthoFinder output from all 47 species
LOC_Os07g01940.1 SCC2, ATSCC2,... adherin (SCC2) 0.04 OrthoFinder output from all 47 species
Lfl_g05042 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10437214g0020 SCC2, ATSCC2, EMB2773 adherin (SCC2) 0.02 OrthoFinder output from all 47 species
MA_97686g0010 SCC2, ATSCC2, EMB2773 adherin (SCC2) 0.02 OrthoFinder output from all 47 species
Mp4g10640.1 SCC2, ATSCC2, EMB2773 adherin (SCC2) 0.03 OrthoFinder output from all 47 species
Ppi_g05355 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR026003 Cohesin_HEAT 6 44
IPR024986 Nipped-B_C 609 804
No external refs found!