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  5. Pp3c22_3230V3.1

Pp3c22_3230V3.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0002673 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002673_tree ,
OG_02_0001952 (LandPlants) Phylogenetic Tree(s): OG_02_0001952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_3230V3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00034670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.02 Archaeplastida
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.02 Archaeplastida
Zm00001e035434_P001 No alias plastidial mRNA processing factor (PPR10) 0.02 Archaeplastida
AMTR_s00029p00034670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.02 LandPlants
AT5G02860 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 LandPlants
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
MA_96691g0010 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
Zm00001e035434_P001 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 411 471
IPR002885 Pentatricopeptide_repeat 181 200
IPR002885 Pentatricopeptide_repeat 249 277
IPR002885 Pentatricopeptide_repeat 803 826
IPR002885 Pentatricopeptide_repeat 491 538
IPR002885 Pentatricopeptide_repeat 351 398
IPR002885 Pentatricopeptide_repeat 736 782
IPR002885 Pentatricopeptide_repeat 667 712
IPR002885 Pentatricopeptide_repeat 561 610
IPR002885 Pentatricopeptide_repeat 280 329
No external refs found!