Pp3c22_3230V3.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0002673 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002673_tree ,
OG_02_0001952 (LandPlants) Phylogenetic Tree(s): OG_02_0001952_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_3230V3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00034670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.02 Archaeplastida
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.02 Archaeplastida
Zm00001e035434_P001 No alias plastidial mRNA processing factor (PPR10) 0.02 Archaeplastida
AMTR_s00029p00034670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.02 LandPlants
AT5G02860 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 LandPlants
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
MA_96691g0010 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
Zm00001e035434_P001 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 411 471
IPR002885 Pentatricopeptide_repeat 181 200
IPR002885 Pentatricopeptide_repeat 249 277
IPR002885 Pentatricopeptide_repeat 803 826
IPR002885 Pentatricopeptide_repeat 491 538
IPR002885 Pentatricopeptide_repeat 351 398
IPR002885 Pentatricopeptide_repeat 736 782
IPR002885 Pentatricopeptide_repeat 667 712
IPR002885 Pentatricopeptide_repeat 561 610
IPR002885 Pentatricopeptide_repeat 280 329
No external refs found!