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Aliases : Aspi01Gene14575
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene14575.t1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00032p00219990 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G50270 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT3G22150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G49710 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035616 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069271 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g095447 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g40807 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g25481 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g03812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06397 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07140 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13525 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18255 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18398 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30595 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g31795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55221 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g59722 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023921 | No alias | not classified & original description: CDS=1-2157 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036252 | No alias | not classified & original description: CDS=1-1656 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G042200.1 | Ceric.07G042200 | not classified & original description: pacid=50626031... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.21G046100.1 | Ceric.21G046100 | not classified & original description: pacid=50602747... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g19072 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30402 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g18940 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50023 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g17418 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g10800.1 | DOT4, LOC_Os01g10800 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g38580.1 | EMB2261, LOC_Os03g38580 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g18947 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07406 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_10435641g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.01 | OrthoFinder output from all 47 species | |
| MA_109016g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g41721 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g23075 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g21500 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62991 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0016.g006762 | No alias | nucleoporin of nuclear pore complex *(NUP98) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010154 | No alias | not classified & original description: CDS=1-2595 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0072.g016959 | No alias | not classified & original description: CDS=1-1596 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14540 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16575 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g35116 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37180 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo113567 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g016540.2.1 | Solyc04g016540 | Pentatricopeptide repeat-containing protein At2g39620... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc04g076800.3.1 | CRR22, Solyc04g076800 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g017370.3.1 | Solyc11g017370 | RNA editing factor (AEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00965 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g05652 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g47727 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g45955 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002552_P001 | Zm00001e002552 | RNA editing factor (SEL1/PDM1) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015440_P001 | CRR22, Zm00001e015440 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e029819_P003 | CRR22, Zm00001e029819 | RNA editing factor (CRR22) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046848 | E_motif | 841 | 903 |
| IPR002885 | Pentatricopeptide_repeat | 598 | 619 |
| IPR002885 | Pentatricopeptide_repeat | 727 | 753 |
| IPR002885 | Pentatricopeptide_repeat | 222 | 251 |
| IPR002885 | Pentatricopeptide_repeat | 526 | 554 |
| IPR002885 | Pentatricopeptide_repeat | 424 | 452 |
| IPR002885 | Pentatricopeptide_repeat | 194 | 215 |
| IPR002885 | Pentatricopeptide_repeat | 496 | 522 |
| IPR002885 | Pentatricopeptide_repeat | 121 | 151 |
| IPR002885 | Pentatricopeptide_repeat | 93 | 119 |
| IPR002885 | Pentatricopeptide_repeat | 699 | 720 |
| IPR002885 | Pentatricopeptide_repeat | 396 | 421 |
| IPR002885 | Pentatricopeptide_repeat | 624 | 670 |
| IPR002885 | Pentatricopeptide_repeat | 320 | 368 |
| IPR002885 | Pentatricopeptide_repeat | 17 | 65 |
| No external refs found! |