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  5. Aspi01Gene14343.t1

Aspi01Gene14343.t1 (ATEXPA4, ATEXP4,...)


Aliases : ATEXPA4, ATEXP4, EXPA4, ATHEXP ALPHA 1.6, Aspi01Gene14343

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene14343.t1
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene00387.t1 ATEXPA10,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene00428.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene00429.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene00505.t1 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08256.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene29952.t1 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene42894.t1 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45675.t1 ATEXPA10,... alpha-class expansin & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene58001.t1 EXPA8, ATHEXP... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene58043.t1 ATEXPA10,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene66973.t1 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene66977.t1 ATEXPA10,... alpha-class expansin & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g03276 ATHEXP BETA 1.4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26486 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os06g50960.1 ATEXPL2, EXPL2,... Expansin-like A4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_467939g0010 ATEXPL2, EXPL2,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
Ore_g07848 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43367 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c7_12810V3.1 ATEXPA4, ATEXP4,... expansin A14 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 204 281
IPR009009 RlpA-like_DPBB 106 193
No external refs found!