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  5. Aspi01Gene13944.t1

Aspi01Gene13944.t1 (AGL18, Aspi01Gene13944)


Aliases : AGL18, Aspi01Gene13944

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene13944.t1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00214260 AGL66,... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AMTR_s00047p00181740 AGL7, AP1,... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00198970 XAL1, AGL12,... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AT1G24260 AGL9, SEP3 K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT1G69120 AGL7, AP1 K-box region and MADS-box transcription factor family protein 0.04 OrthoFinder output from all 47 species
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT4G11880 AGL14 AGAMOUS-like 14 0.04 OrthoFinder output from all 47 species
AT5G15800 AGL2, SEP1 K-box region and MADS-box transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT5G20240 PI K-box region and MADS-box transcription factor family protein 0.04 OrthoFinder output from all 47 species
AT5G23260 AGL32, TT16, ABS K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT5G51860 No alias K-box region and MADS-box transcription factor family protein 0.04 OrthoFinder output from all 47 species
AT5G60440 AGL62 AGAMOUS-like 62 0.03 OrthoFinder output from all 47 species
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.03 OrthoFinder output from all 47 species
Aev_g20345 AGL7, AP1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05851 AGL30 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28162 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38807 AGL91 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42778 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19952 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68989.t2 SOC1, AGL20,... MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s2186.g109823 No alias not classified & original description: CDS=5-496 0.03 OrthoFinder output from all 47 species
Cba_g13784 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38860 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G094900.1 AGL7, AP1,... MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G051800.1 GL19, AGL19,... MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.12G052200.1 GL19, AGL19,... MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.16G027500.1 AGL16, Ceric.16G027500 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G021900.1 AGL16, Ceric.29G021900 MADS/AGL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.34G033600.1 AGL16, Ceric.34G033600 MADS/AGL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g08553 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01008560001 SOC1, AGL20, ATSOC1 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01010218001 AGL62 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01012110001 AGL32, TT16, ABS RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
GSVIVT01012249001 AGL2, SEP1 RNA biosynthesis.transcriptional activation.MADS box... 0.05 OrthoFinder output from all 47 species
GSVIVT01014093001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01019883001 GL19, AGL19 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01025945001 STK, AGL11 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01027577001 AGL6 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01035477001 AGL30 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
Gb_12581 AGL6 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Gb_15398 PI transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os02g07430.1 AGL32, TT16,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os06g11970.1 AGL66, LOC_Os06g11970 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
LOC_Os08g38590.1 AGL104, LOC_Os08g38590 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os10g39130.1 GL19, AGL19,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Lfl_g13167 AGL42 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36451 AGL6 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38730 AGL8, FUL not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10289256g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
MA_287424g0010 SOC1, AGL20, ATSOC1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2986g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_51624g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
MA_6544g0010 STK, AGL11 Floral homeotic protein AGAMOUS OS=Panax ginseng... 0.07 OrthoFinder output from all 47 species
MA_9544285g0010 AGL42 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g11366 AGL3, SEP4 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g04651 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g51490 AGL24 regulatory protein *(SVP/AGL24) of floral meristem... 0.03 OrthoFinder output from all 47 species
Pir_g54533 MAF2, AGL31 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21886 AGL30 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62136 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025791 AGL65 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0271.g027022 AGL7, AP1 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g27238 No alias MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48748 No alias MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48749 No alias MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo85851 AGL10, CAL1, CAL RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
Solyc01g106710.1.1 AGL62, Solyc01g106710 component MED19 of head module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Solyc02g089200.4.1 AGL2, SEP1,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc02g091550.2.1 AGL21, Solyc02g091550 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc03g114830.3.1 AGL8, FUL, Solyc03g114830 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc04g005320.3.1 AGL2, SEP1,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Solyc05g012020.4.1 AGL2, SEP1,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Solyc05g015750.3.1 AGL9, SEP3,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc06g069430.3.1 AGL8, FUL, Solyc06g069430 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Solyc07g055920.4.1 SHP2, AGL5,... transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
Spa_g16602 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28690 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47544 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027034_P001 PI, Zm00001e027034 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e034629_P001 AGL9, SEP3,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e036159_P001 AGL24, Zm00001e036159 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!