Aspi01Gene13553.t1 (CDF3, Aspi01Gene13553)

Aliases : CDF3, Aspi01Gene13553

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene13553.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00248860	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00264070	CDF3,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT1G26790	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT3G21270	ADOF2, DOF2	DOF zinc finger protein 2	0.01	OrthoFinder output from all 47 species
AT3G47500	CDF3	cycling DOF factor 3	0.03	OrthoFinder output from all 47 species
AT3G61850	DAG1	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT5G60850	OBP4	OBF binding protein 4	0.01	OrthoFinder output from all 47 species
AT5G62430	CDF1	cycling DOF factor 1	0.02	OrthoFinder output from all 47 species
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
Adi_g024682	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g050522	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g086178	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g01888	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11020	CDF2	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Als_g18462	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g20563	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.07	OrthoFinder output from all 47 species
Als_g27376	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g18876	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g18797	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0008.g011464	No alias	not classified & original description: CDS=1-2679	0.02	OrthoFinder output from all 47 species
Azfi_s0054.g033832	CDF3	transcription factor *(DOF) & original description: CDS=354-1853	0.03	OrthoFinder output from all 47 species
Cba_g00291	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g06470	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.20G020200.1	CDF1, Ceric.20G020200	transcription factor *(DOF) & original description:...	0.02	OrthoFinder output from all 47 species
Dde_g25853	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011138001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01019969001	CDF1	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01025119001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01029943001	CDF3	RNA biosynthesis.transcriptional activation.C2C2...	0.01	OrthoFinder output from all 47 species
Gb_07177	CDF2	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os03g60630.1	LOC_Os03g60630	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os04g47990.1	LOC_Os04g47990	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os07g32510.1	TMO6, LOC_Os07g32510	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os07g48570.1	CDF2, LOC_Os07g48570	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Lfl_g01645	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
MA_18267g0010	HCA2, DOF5.6	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Mp1g18540.1	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g15852	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g33990	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g12534	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g19399	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g26562	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008681	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=453-2084	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517	CDF3	transcription factor *(DOF) & original description: CDS=154-1659	0.03	OrthoFinder output from all 47 species
Solyc02g067230.3.1	CDF2, Solyc02g067230	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc02g088070.3.1	CDF3, Solyc02g088070	transcription factor (DOF)	0.01	OrthoFinder output from all 47 species
Solyc04g070960.3.1	Solyc04g070960	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc05g007880.4.1	CDF1, Solyc05g007880	Cyclic dof factor 2 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Solyc06g062520.1.1	ADOF1, DOF1,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc06g069760.3.1	CDF3, Solyc06g069760	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Spa_g41105	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g49511	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g28492	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e002951_P002	Zm00001e002951	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e007228_P002	Zm00001e007228	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e010454_P001	TMO6, Zm00001e010454	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e029641_P001	OBP3, Zm00001e029641	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	136	192

External Links

No external refs found!

Aspi01Gene13553.t1 (CDF3, Aspi01Gene13553)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation