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  5. Aspi01Gene12777.t1

Aspi01Gene12777.t1 (Aspi01Gene12777)


Aliases : Aspi01Gene12777

Description : not classified & original description: none


Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene12777.t1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.03 OrthoFinder output from all 47 species
Cba_g12627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G031400.1 Ceric.16G031400 not classified & original description: pacid=50589889... 0.03 OrthoFinder output from all 47 species
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.03 OrthoFinder output from all 47 species
Nbi_g36090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012097 No alias not classified & original description: CDS=661-1995 0.03 OrthoFinder output from all 47 species
Sam_g13761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 452 498
IPR002885 Pentatricopeptide_repeat 942 988
IPR002885 Pentatricopeptide_repeat 313 359
IPR002885 Pentatricopeptide_repeat 685 745
IPR002885 Pentatricopeptide_repeat 861 920
IPR002885 Pentatricopeptide_repeat 790 851
IPR002885 Pentatricopeptide_repeat 425 448
IPR002885 Pentatricopeptide_repeat 632 657
IPR002885 Pentatricopeptide_repeat 387 411
No external refs found!