Aspi01Gene12549.t3 (Aspi01Gene12549)

Aliases : Aspi01Gene12549

Description : sporopollenin precursor exporter *(ABCG26) & original description: none

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene12549.t3

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021582.39	No alias	ABC transporter G family member 22 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_00289	ABCG26, WBC27	sporopollenin precursor exporter. subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os03g06139.1	LOC_Os03g06139	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Ore_g37168	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e037432_P001	ABCG26, WBC27,...	sporopollenin precursor exporter. subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	264	323
IPR013525	ABC_2_trans	400	608
IPR003439	ABC_transporter-like_ATP-bd	85	235

External Links

No external refs found!