Solyc01g016410.3.1 (Solyc01g016410.3)


Aliases : Solyc01g016410.3

Description : No description available


Gene families : OG_01_0000020 (Gene family) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g016410.3.1
Cluster HCCA cluster: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT1G14200 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G55530 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G40830 RHC1A RING-H2 finger C1A 0.02 Gene family
AT3G13430 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G46620 No alias zinc finger (C3HC4-type RING finger) family protein 0.02 Gene family
AT5G01980 No alias RING/U-box superfamily protein 0.02 Gene family
AT5G59550 No alias zinc finger (C3HC4-type RING finger) family protein 0.04 Gene family
LOC_Os02g09820 Os02g0191500 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os03g16480 Os03g0271600 No description available 0.04 Gene family
LOC_Os03g20870 Os03g0324900 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os05g01940 Os05g0110000 No description available 0.03 Gene family
LOC_Os06g42700 Os06g0633500 31.1 cell.organisation Encodes a RING-H2 protein that... 0.03 Gene family
LOC_Os07g43740 Os07g0631200 No description available 0.04 Gene family
LOC_Os08g36170 Os08g0464400 No description available 0.02 Gene family
Smo8109 PACid_15402722 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc02g065650.1.1 Solyc02g065650.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d007027 GRMZM2G123212 No description available 0.04 Gene family
Zm00001d011076 GRMZM2G364612 No description available 0.03 Gene family
Zm00001d035677 GRMZM2G567897 No description available 0.02 Gene family
Zm00001d047476 GRMZM2G164358 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d047560 GRMZM2G027120 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATCRT1 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 129 171
No external refs found!