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  5. Aspi01Gene11108.t1

Aspi01Gene11108.t1 (Aspi01Gene11108)


Aliases : Aspi01Gene11108

Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene11108.t1

Target Alias Description ECC score Gene Family Method Actions
Aop_g53257 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05746.t1 Aspi01Gene05746 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene21045.t1 Aspi01Gene21045 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23389.t1 Aspi01Gene23389 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s3305.g115285 No alias not classified & original description: CDS=1-1707 0.01 OrthoFinder output from all 47 species
Cba_g09340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G075900.1 Ceric.12G075900 not classified & original description: pacid=50601390... 0.03 OrthoFinder output from all 47 species
Ceric.28G012400.1 Ceric.28G012400 not classified & original description: pacid=50570345... 0.04 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.05 OrthoFinder output from all 47 species
Gb_27340 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Ore_g10991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23436 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g62350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g068250.2.1 Solyc01g068250 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041085_P001 Zm00001e041085 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 305 334
IPR001680 WD40_repeat 436 466
IPR001680 WD40_repeat 387 421
IPR001680 WD40_repeat 479 521
IPR001680 WD40_repeat 340 375
No external refs found!