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  5. Aspi01Gene10966.t1

Aspi01Gene10966.t1 (Aspi01Gene10966)


Aliases : Aspi01Gene10966

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene10966.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT3G62890 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g003776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g009423 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g072273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55960.t1 SLO1, Aspi01Gene55960 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0001.g000844 No alias not classified & original description: CDS=1-1557 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008393 CRR22 not classified & original description: CDS=1-1839 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010197 OTP82 not classified & original description: CDS=163-897 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011091 No alias not classified & original description: CDS=1-1857 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.02 OrthoFinder output from all 47 species
Azfi_s0164.g054282 No alias not classified & original description: CDS=1-4443 0.03 OrthoFinder output from all 47 species
Azfi_s1596.g104539 No alias not classified & original description: CDS=111-3779 0.02 OrthoFinder output from all 47 species
Azfi_s1721.g106131 No alias not classified & original description: CDS=1-2793 0.03 OrthoFinder output from all 47 species
Azfi_s2068.g108965 No alias not classified & original description: CDS=97-387 0.02 OrthoFinder output from all 47 species
Ceric.17G074800.1 Ceric.17G074800 not classified & original description: pacid=50618293... 0.02 OrthoFinder output from all 47 species
Ceric.20G008800.1 Ceric.20G008800 not classified & original description: pacid=50566037... 0.03 OrthoFinder output from all 47 species
Ceric.28G056200.1 Ceric.28G056200 not classified & original description: pacid=50570685... 0.03 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
Dac_g25020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07619 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021576001 BRCA1, ATBRCA1 DNA damage response.BRCA1–BARD1 DNA-damage response... 0.04 OrthoFinder output from all 47 species
Len_g24399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41118 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17317 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32824 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013956 No alias not classified & original description: CDS=1-2181 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023411 REME1 not classified & original description: CDS=1-1494 0.03 OrthoFinder output from all 47 species
Sam_g17282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo92008 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Solyc04g064750.2.1 Solyc04g064750 RNA editing factor (MEF12). serine carboxypeptidase 0.02 OrthoFinder output from all 47 species
Spa_g06014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 525 550
IPR002885 Pentatricopeptide_repeat 151 178
IPR002885 Pentatricopeptide_repeat 222 247
IPR046848 E_motif 870 903
IPR002885 Pentatricopeptide_repeat 349 396
IPR002885 Pentatricopeptide_repeat 248 295
IPR002885 Pentatricopeptide_repeat 449 497
IPR002885 Pentatricopeptide_repeat 655 700
IPR002885 Pentatricopeptide_repeat 752 799
IPR002885 Pentatricopeptide_repeat 551 598
No external refs found!