Aliases : PME31, ATPME31, Aspi01Gene10886
Description : pectin methylesterase & original description: none
Gene families : OG0003622 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003622_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aspi01Gene10886.t1 | |
Cluster | HCCA: Cluster_53 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01011459001 | PME31, ATPME31 | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g24977 | PME31, ATPME31 | pectin methylesterase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0108.g020449 | PME31, ATPME31 | pectin methylesterase & original description: CDS=560-1342 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g01705 | No alias | pectin methylesterase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g04563 | PME31, ATPME31 | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g14005 | PME31, ATPME31 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g10561 | PME31, ATPME31 | pecTin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000070 | Pectinesterase_cat | 8 | 291 |
No external refs found! |