Aspi01Gene10809.t1 (SAG15, CLPD, ERD1,...)


Aliases : SAG15, CLPD, ERD1, Aspi01Gene10809

Description : chaperone component *(ClpD) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene10809.t1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00179810 CLPB4, CLPB-M,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Als_g63134 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Aob_g15153 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42026 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22434 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Cba_g20352 HSP93-V, DCA1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01014062001 SAG15, CLPD, ERD1 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Len_g34142 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022057 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 482 554
IPR004176 Clp_R_dom 124 172
IPR004176 Clp_R_dom 203 252
IPR003959 ATPase_AAA_core 699 874
IPR003959 ATPase_AAA_core 338 456
IPR019489 Clp_ATPase_C 881 960
No external refs found!