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  5. Aspi01Gene10029.t1

Aspi01Gene10029.t1 (4CL1, AT4CL1, 4CL.1,...)


Aliases : 4CL1, AT4CL1, 4CL.1, Aspi01Gene10029

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene10029.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00101790 4CL3,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 OrthoFinder output from all 47 species
Adi_g103472 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G083800.1 AT4CL2, 4CL2,... EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Dcu_g09728 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Dde_g31505 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01029182001 4CL1, AT4CL1, 4CL.1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01029183001 AT4CL2, 4CL2 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Nbi_g05798 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006230 4CL3 not classified & original description: CDS=1-975 0.06 OrthoFinder output from all 47 species
Solyc03g097030.3.1 4CL3, Solyc03g097030 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
Solyc07g008360.2.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Solyc12g042460.2.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 449 524
IPR000873 AMP-dep_Synth/Lig_com 30 440
No external refs found!