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  5. Aspi01Gene09499.t1

Aspi01Gene09499.t1 (emb1507, Aspi01Gene09499)


Aliases : emb1507, Aspi01Gene09499

Description : RNA helicase *(Brr2) & original description: none


Gene families : OG0001175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene09499.t1

Target Alias Description ECC score Gene Family Method Actions
AT1G20960 emb1507 U5 small nuclear ribonucleoprotein helicase, putative 0.03 OrthoFinder output from all 47 species
Ehy_g04070 No alias RNA helicase *(Brr2) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14398 No alias RNA helicase *(Brr2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035676_P001 emb1507, Zm00001e035676 RNA helicase (Brr2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 1352 1520
IPR004179 Sec63-dom 1005 1307
IPR004179 Sec63-dom 1838 2156
IPR001650 Helicase_C 740 881
IPR041094 Brr2_helicase_PWI 267 376
IPR011545 DEAD/DEAH_box_helicase_dom 506 681
No external refs found!