1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene09339.t1

Aspi01Gene09339.t1 (RPT3, NPH3, JK218,...)


Aliases : RPT3, NPH3, JK218, Aspi01Gene09339

Description : substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex & original description: none


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene09339.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00155420 RPT3, NPH3,... Root phototropism protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00211770 MAB4, NPY1, ENP,... BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G14820 NPY2 Phototropic-responsive NPH3 family protein 0.04 OrthoFinder output from all 47 species
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.02 OrthoFinder output from all 47 species
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
Aob_g12514 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aob_g29716 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g025021 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.06 OrthoFinder output from all 47 species
Azfi_s0076.g037787 No alias not classified & original description: CDS=431-2302 0.03 OrthoFinder output from all 47 species
Azfi_s0088.g042460 RPT3, NPH3, JK218 not classified & original description: CDS=210-2522 0.02 OrthoFinder output from all 47 species
Ceric.11G059700.1 Ceric.11G059700 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.32G010700.1 Ceric.32G010700 not classified & original description: pacid=50597870... 0.03 OrthoFinder output from all 47 species
Gb_41063 RPT3, NPH3, JK218 Root phototropism protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os02g35970.1 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Len_g08735 RPT3, NPH3, JK218 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01322 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Nbi_g03754 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Pir_g09759 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Ppi_g03158 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001683 No alias not classified & original description: CDS=1-1248 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016653 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Sam_g25277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g098820.3.1 RPT3, NPH3,... Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Spa_g22011 NPY3 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e003063_P004 NPY2, Zm00001e003063 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e012451_P002 NPY2, Zm00001e012451 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e014883_P001 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 114 201
IPR027356 NPH3_dom 310 587
No external refs found!