Aspi01Gene09170.t1 (PTB2, ATPTB2, Aspi01Gene09170)

Aliases : PTB2, ATPTB2, Aspi01Gene09170

Description : RNA splicing factor *(PTB) & original description: none

Gene families : OG0001527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001527_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene09170.t1

Target	Alias	Description	ECC score	Gene Family Method
Ceric.04G057500.1	PTB1, PTB,...	RNA splicing factor *(PTB) & original description:...	0.03	OrthoFinder output from all 47 species
LOC_Os01g43170.1	PTB2, ATPTB2,...	PTB-type RNA splicing factor	0.03	OrthoFinder output from all 47 species
Sam_g36099	No alias	RNA splicing factor *(PTB) & original description: none	0.02	OrthoFinder output from all 47 species
Smo104811	PTB2, ATPTB2	RNA processing.RNA splicing.spliceosome-associated...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	22	72
IPR021790	PTBP1-like_RRM2	242	320

External Links

No external refs found!