Aliases : PGP11, Aspi01Gene08446
Description : subfamily ABCB transporter & original description: none
Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aspi01Gene08446.t1 | |
Cluster | HCCA: Cluster_39 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00145p00075460 | PGP20,... | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
AT2G39480 | PGP6 | P-glycoprotein 6 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g060981 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g088159 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g088971 | No alias | subfamily ABCB transporter & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene08454.t1 | PGP11, Aspi01Gene08454 | subfamily ABCB transporter & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene32172.t1 | PGP2, Aspi01Gene32172 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene43896.t1 | PGP6, Aspi01Gene43896 | subfamily ABCB transporter & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Dac_g05507 | ABCB19,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g03201 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g29451 | ABCB19,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01016617001 | PGP20 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
Gb_08933 | PGP11 | ABC transporter B family member 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g34970.1 | PGP11, LOC_Os01g34970 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g17180.1 | PGP20, LOC_Os03g17180 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Mp2g02910.1 | ABCB19,... | auxin efflux transporter (ABCB19). subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g24809 | PGP2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g09833 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g04001 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g18874 | PGP2 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0014.g006153 | PGP11 | subfamily ABCB transporter & original description: CDS=261-4235 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0111.g020710 | ABCB19,... | not classified & original description: CDS=1-1380 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g19483 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo169182 | ATPGP4, PGP4, ABCB4, MDR4 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
Smo419451 | No alias | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g26470 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e018488_P001 | PGP20, Zm00001e018488 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e020073_P001 | ATPGP4, PGP4,... | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
MF | GO:0140359 | ABC-type transporter activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |