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  5. Aspi01Gene08384.t1

Aspi01Gene08384.t1 (LZF1, STH3, DBB3,...)


Aliases : LZF1, STH3, DBB3, Aspi01Gene08384

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene08384.t1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00250410 LZF1, STH3,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G75540 STH2 salt tolerance homolog2 0.03 OrthoFinder output from all 47 species
AT2G47890 No alias B-box type zinc finger protein with CCT domain 0.03 OrthoFinder output from all 47 species
Aob_g06573 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06936 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02213 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024204001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
LOC_Os04g41560.2 STO, LOC_Os04g41560 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os12g10660.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Mp8g01190.1 STO transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Pir_g65956 No alias BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g11699 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32457 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Spa_g54082 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09555 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007720_P001 STO, Zm00001e007720 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Zm00001e022915_P001 STO, Zm00001e022915 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Zm00001e041335_P001 Zm00001e041335 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 113 155
No external refs found!