Aspi01Gene07774.t1 (HSI2, VAL1, Aspi01Gene07774)

Aliases : HSI2, VAL1, Aspi01Gene07774

Description : LAV-VAL-type transcription factor & original description: none

Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene07774.t1
Cluster	HCCA: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method	Actions
Smo88108	HSI2, VAL1	RNA biosynthesis.transcriptional activation.B3...	0.02	OrthoFinder output from all 47 species
Spa_g06722	HSI2, VAL1	LAV-VAL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	114	214
IPR011124	Znf_CW	590	632

External Links

No external refs found!