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  5. Aspi01Gene07327.t1

Aspi01Gene07327.t1 (Aspi01Gene07327)


Aliases : Aspi01Gene07327

Description : cation exchanger *(NCL/EF-CAX) & original description: none


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene07327.t1

Target Alias Description ECC score Gene Family Method Actions
AT2G34020 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Ala_g28095 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z041000.1 Ceric.1Z041000 cation exchanger *(NCL/EF-CAX) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.20G076200.1 Ceric.20G076200 cation exchanger *(NCL/EF-CAX) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01014241001 No alias Solute transport.carrier-mediated transport.CDF... 0.04 OrthoFinder output from all 47 species
GSVIVT01020661001 No alias Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
MA_135835g0010 No alias Sodium/calcium exchanger NCL1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_98848g0020 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Mp8g02300.1 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Mp8g02310.1 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Pir_g66454 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28898 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51259 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014320_P001 Zm00001e014320 cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 334 408
IPR004837 NaCa_Exmemb 109 288
IPR004837 NaCa_Exmemb 465 583
No external refs found!