1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene07170.t2

Aspi01Gene07170.t2 (MYB3R-1, ATMYB3R1,...)


Aliases : MYB3R-1, ATMYB3R1, PC-MYB1, MYB3R1, ATMYB3R-1, Aspi01Gene07170

Description : R1R2R3-MYB transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene07170.t2
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00169630 MYB73, ATMYB73,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00061950 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.03 OrthoFinder output from all 47 species
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.03 OrthoFinder output from all 47 species
Cba_g03902 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ceric.01G063500.1 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dde_g02281 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24983 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029941001 LOF2, MYB105, ATMYB105 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
MA_948059g0010 ATMYB3R5, MYB3R-5 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Ore_g02585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16792 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010615 AtMYB98, MYB98 MYB class-R2R3 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011562 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016477 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sam_g14793 No alias MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Solyc05g007160.3.1 MYB88, AtMYB88,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc05g052850.3.1 AtMYB109,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e014203_P004 AtMYB3R4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 51 97
IPR001005 SANT/Myb 103 149
IPR001005 SANT/Myb 155 197
No external refs found!