Aspi01Gene07120.t1 (PDF2, Aspi01Gene07120)

Aliases : PDF2, Aspi01Gene07120

Description : HD-ZIP IV-type transcription factor & original description: none

Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene07120.t1

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene70273.t1	PDF2, Aspi01Gene70273	HD-ZIP IV-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g01321	PDF2	HD-ZIP IV-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g67903	PDF2	HD-ZIP IV-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g07707	PDF2	HD-ZIP IV-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g14381	PDF2	HD-ZIP IV-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g21421	PDF2	HD-ZIP IV-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g19174	EDT1, HDG11, ATHDG11	HD-ZIP IV-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g09419	PDF2	HD-ZIP IV-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e041435_P003	HDG1, HD-GL2-1,...	transcription factor (HD-ZIP IV)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008289	lipid binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	84	137
IPR002913	START_lipid-bd_dom	287	511

External Links

No external refs found!