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Aliases : Aspi01Gene07080
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene07080.t1 | |
| Cluster | HCCA: Cluster_69 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g012996 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17642 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12481 | OTP82 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g17004 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06880 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18510 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55287 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19060 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g16410 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g07194 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g20548 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67898 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67906 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G062000.1 | Ceric.10G062000 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G076500.1 | Ceric.17G076500 | not classified & original description: pacid=50617139... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G049100.1 | Ceric.18G049100 | not classified & original description: pacid=50621467... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.19G076100.1 | Ceric.19G076100 | not classified & original description: pacid=50575482... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021035.24 | No alias | Pentatricopeptide repeat-containing protein At1g63080,... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g23468 | CRR22 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g08991 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g21341 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g47882 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g03570 | EMB2758 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g25197 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012159001 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01032721001 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g38580.1 | EMB2261, LOC_Os03g38580 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g03881 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03418 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_8893194g0010 | MEF1 | RNA editing factor (MEF1) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g31349 | CRR22 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g34455 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g38951 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g40933 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g41736 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23480 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02310 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02495 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03091 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g10348 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g11526 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29583 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g46357 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53950 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07050 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16575 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24227 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g38908 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39953 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g45851 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g007850.2.1 | Solyc01g007850 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g016540.2.1 | Solyc04g016540 | Pentatricopeptide repeat-containing protein At2g39620... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc08g013850.1.1 | CRR21, Solyc08g013850 | RNA editing factor (CRR21) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00965 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g06501 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g18196 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05116 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g26504 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 534 | 559 |
| IPR002885 | Pentatricopeptide_repeat | 183 | 208 |
| IPR002885 | Pentatricopeptide_repeat | 356 | 378 |
| IPR002885 | Pentatricopeptide_repeat | 702 | 728 |
| IPR002885 | Pentatricopeptide_repeat | 481 | 529 |
| IPR002885 | Pentatricopeptide_repeat | 382 | 429 |
| IPR002885 | Pentatricopeptide_repeat | 627 | 675 |
| IPR002885 | Pentatricopeptide_repeat | 280 | 328 |
| No external refs found! |