Solyc01g009320.2.1 (Solyc01g009320.2)


Aliases : Solyc01g009320.2

Description : 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 23 (PUB23)


Gene families : OG_01_0000079 (Gene family) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g009320.2.1
Cluster HCCA cluster: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AT2G35930 PUB23 plant U-box 23 0.04 Gene family
AT3G11840 PUB24 plant U-box 24 0.02 Gene family
LOC_Os02g33590 Os02g0539200 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
LOC_Os04g58920 Os04g0686000 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
LOC_Os08g04470 Os08g0139400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_1663g0020 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.04 Gene family
Smo172230 PACid_15410363 No description available 0.02 Gene family
Solyc01g009330.1.1 Solyc01g009330.1 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Zm00001d002498 GRMZM2G092128 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Zm00001d016764 GRMZM2G041141 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 6 83
No external refs found!