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  5. Aspi01Gene06540.t1

Aspi01Gene06540.t1 (AFB2, Aspi01Gene06540)


Aliases : AFB2, Aspi01Gene06540

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene06540.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00126140 AFB2,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT5G49980 AFB5 auxin F-box protein 5 0.04 OrthoFinder output from all 47 species
Aob_g11099 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Dac_g11136 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
GSVIVT01003183001 TIR1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01009126001 AFB5 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_04106 COI1 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species
MA_63147g0010 COI1 Coronatine-insensitive protein homolog 1b OS=Oryza... 0.03 OrthoFinder output from all 47 species
MA_92309g0010 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Nbi_g04248 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Sam_g44971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05740 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 101 146
IPR041567 COI1_F-box 43 80
No external refs found!