Aliases : ARF19, IAA22, ARF11, Aspi01Gene05880
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00267580 | ARF19, IAA22,... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00034p00110140 | ARF4 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AT2G46530 | ARF11 | auxin response factor 11 | 0.02 | OrthoFinder output from all 47 species | |
AT3G61830 | ARF18 | auxin response factor 18 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g061151 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g088063 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g088539 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g103007 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g27966 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0065.g035933 | ARF6 | not classified & original description: CDS=1-678 | 0.02 | OrthoFinder output from all 47 species | |
Dde_g46643 | HSS, ARF1-BP, ARF2, ORE14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01015035001 | ARF19, IAA22, ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01027166001 | ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
Gb_32404 | ARF4 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g35140.1 | ARF1, LOC_Os02g35140 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g36054.1 | ARF1, LOC_Os04g36054 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
MA_10022392g0010 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g19283 | ARF4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g04439 | ARF10 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g11690 | ARF6 | transcriptional repressor *(IAA/AUX) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g15721 | ARF1 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0047.g013444 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g103050.3.1 | ARF1, Solyc01g103050 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g007810.4.1 | ARF16, Solyc09g007810 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g069500.2.1 | ARF10, Solyc11g069500 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g006350.3.1 | ARF6, Solyc12g006350 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g51847 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018126_P002 | ARF6, Zm00001e018126 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e041910_P003 | ARF8, ATARF8,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |