Aspi01Gene05748.t1 (Aspi01Gene05748)


Aliases : Aspi01Gene05748

Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene05748.t1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00123610 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00059p00197160 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G51930 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g054356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05743.t1 Aspi01Gene05743 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23387.t1 Aspi01Gene23387 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45302.t1 Aspi01Gene45302 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45306.t1 Aspi01Gene45306 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene60159.t1 Aspi01Gene60159 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g09340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G066900.1 Ceric.05G066900 not classified & original description: pacid=50578771... 0.04 OrthoFinder output from all 47 species
Ceric.13G024900.1 Ceric.13G024900 not classified & original description: pacid=50636356... 0.03 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.04 OrthoFinder output from all 47 species
Dac_g02144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_19215 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_27340 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_33498 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10429180g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g25877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29617 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020851 No alias not classified & original description: CDS=1-1557 0.03 OrthoFinder output from all 47 species
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g068250.2.1 Solyc01g068250 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc01g109120.3.1 Solyc01g109120 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g090150.1.1 Solyc02g090150 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g19133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007790_P001 Zm00001e007790 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041085_P001 Zm00001e041085 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 229 264
IPR001680 WD40_repeat 277 312
IPR001680 WD40_repeat 191 223
IPR001680 WD40_repeat 327 357
IPR001680 WD40_repeat 366 405
No external refs found!