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  5. Aspi01Gene05601.t1

Aspi01Gene05601.t1 (STK, AGL11, Aspi01Gene05601)


Aliases : STK, AGL11, Aspi01Gene05601

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene05601.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g051961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g072612 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10888 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17970 AGL16 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05611.t1 ANR1, AGL44,... MADS/AGL-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene09663.t1 Aspi01Gene09663 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene15814.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene15816.t1 SOC1, AGL20,... MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene17593.t1 AGL104, Aspi01Gene17593 MADS/AGL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene19452.t1 AGL16, Aspi01Gene19452 MADS/AGL-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene19456.t1 SOC1, AGL20,... MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene49755.t1 Aspi01Gene49755 MADS/AGL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene49756.t1 STK, AGL11,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene49767.t1 STK, AGL11,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53310.t1 AGL16, Aspi01Gene53310 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene54037.t1 Aspi01Gene54037 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene54037.t3 Aspi01Gene54037 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0001.g000595 No alias MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g011751 No alias MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0242.g059800 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G051800.1 GL19, AGL19,... MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g01217 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11287 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50123 AGL3, SEP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g66030.1 PI, LOC_Os01g66030 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
LOC_Os05g34940.1 PI, LOC_Os05g34940 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Lfl_g10554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38436 AGL6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31321 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31708 AGL16 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05686 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44138 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01864 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18075 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19814 AGL10, CAL1, CAL MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23267 AGL70, MAF3, FCL3 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49561 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51807 AGL15 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58877 AGL30 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c16_12230V3.1 Pp3c16_12230 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g29083 ANR1, AGL44 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61246 AGL21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06712 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21681 No alias MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36311 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48748 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo437868 AGL29 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
Solyc12g042015.1.1 AGL62, Solyc12g042015 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Spa_g09518 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!