Aspi01Gene05563.t1 (APUM4, PUM4, Aspi01Gene05563)

Aliases : APUM4, PUM4, Aspi01Gene05563

Description : not classified & original description: none

Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene05563.t1
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00012p00251030	APUM2, PUM2,...	Pumilio homolog 2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Adi_g018255	APUM2, PUM2	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012940	NABP	376	785
IPR001313	Pumilio_RNA-bd_rpt	1053	1082
IPR001313	Pumilio_RNA-bd_rpt	973	1004
IPR001313	Pumilio_RNA-bd_rpt	1007	1041
IPR001313	Pumilio_RNA-bd_rpt	934	966
IPR001313	Pumilio_RNA-bd_rpt	862	895
IPR001313	Pumilio_RNA-bd_rpt	904	929
IPR001313	Pumilio_RNA-bd_rpt	790	824
IPR001313	Pumilio_RNA-bd_rpt	828	860

External Links

No external refs found!