Aspi01Gene05499.t1 (Aspi01Gene05499)

Aliases : Aspi01Gene05499

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene05499.t1
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00181450	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AMTR_s00031p00236610	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00063p00178530	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00075p00150250	evm_27.TU.AmTr_v1...	ABC transporter G family member 8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT3G53510	No alias	ABC-2 type transporter family protein	0.02	OrthoFinder output from all 47 species
AT3G55130	WBC19, ATWBC19	white-brown complex homolog 19	0.03	OrthoFinder output from all 47 species
AT4G25750	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
AT5G19410	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
AT5G52860	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
Ala_g23786	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g14907	No alias	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0120.g046757	No alias	subfamily ABCG transporter & original description: CDS=1-2250	0.04	OrthoFinder output from all 47 species
Cba_g03340	No alias	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g06245	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g07276	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g17500	No alias	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.14G055400.1	Ceric.14G055400	subfamily ABCG transporter & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g08003	No alias	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g04073	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01003847001	No alias	ABC transporter G family member 17 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01014222001	No alias	ABC transporter G family member 10 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01022346001	No alias	ABC transporter G family member 5 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01037274001	No alias	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_24085	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os03g17350.1	LOC_Os03g17350	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
LOC_Os05g02890.1	LOC_Os05g02890	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os06g30730.1	LOC_Os06g30730	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Lfl_g26422	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g39649	No alias	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
MA_529254g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp1g25240.1	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Mp2g07990.1	No alias	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Mp5g15770.1	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Nbi_g11905	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g31857	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006110	No alias	subfamily ABCG transporter & original description: CDS=1-2232	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023718	No alias	not classified & original description: CDS=1-2514	0.03	OrthoFinder output from all 47 species
Smo84236	No alias	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo93898	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc04g010210.1.1	Solyc04g010210	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Solyc07g053300.1.1	Solyc07g053300	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Spa_g10980	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g29782	No alias	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g11561	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g44760	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001269_P001	Zm00001e001269	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e020697_P001	Zm00001e020697	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Zm00001e031556_P001	Zm00001e031556	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	383	592
IPR003439	ABC_transporter-like_ATP-bd	87	239

External Links

No external refs found!

Aspi01Gene05499.t1 (Aspi01Gene05499)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation