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  5. Aspi01Gene05468.t1

Aspi01Gene05468.t1 (SWI3A, CHB1, ATSWI3A,...)


Aliases : SWI3A, CHB1, ATSWI3A, Aspi01Gene05468

Description : SMARCC component *(SWI3) of chromatin remodeling complex & original description: none


Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene05468.t1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Ceric.17G074300.1 CHB3, ATSWI3D,... SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
LOC_Os11g08080.1 CHB4, SWI3C,... component BAF255/170 of chromatin remodeling complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007526 SWIRM 20 101
IPR032451 SMARCC_C 526 594
IPR001005 SANT/Myb 226 268
No external refs found!