Aspi01Gene05458.t1 (Aspi01Gene05458)

Aliases : Aspi01Gene05458

Description : not classified & original description: none

Gene families : OG0001618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001618_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene05458.t1

Target	Alias	Description	ECC score	Gene Family Method
AT5G08620	ATRH25, STRS2	DEA(D/H)-box RNA helicase family protein	0.03	OrthoFinder output from all 47 species
Als_g05005	No alias	mRNA helicase *(RH31) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.27G031600.1	Ceric.27G031600	mRNA helicase *(RH31) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g12157	No alias	mRNA helicase *(RH31) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g50517	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01019804001	No alias	DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
LOC_Os06g33520.1	LOC_Os06g33520	DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Pir_g01631	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	357	456

External Links

No external refs found!