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  5. Aspi01Gene05349.t1

Aspi01Gene05349.t1 (HTA6, Aspi01Gene05349)


Aliases : HTA6, Aspi01Gene05349

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene05349.t1

Target Alias Description ECC score Gene Family Method Actions
Als_g04736 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09182 GAMMA-H2AX,... histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g54113 HTA7 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69547 HTA13 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0102.g044568 HTA6 histone *(H2A) & original description: CDS=1-438 0.03 OrthoFinder output from all 47 species
Azfi_s0678.g081837 HTA10 histone *(H2A) & original description: CDS=127-525 0.03 OrthoFinder output from all 47 species
Dac_g11808 HTA6 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g20425 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011033001 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Pir_g21304 HTA7 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 96 111
IPR007125 Histone_H2A/H2B/H3 14 93
No external refs found!