Aspi01Gene05121.t1 (COL1, ATCOL1, Aspi01Gene05121)

Aliases : COL1, ATCOL1, Aspi01Gene05121

Description : floral promoter *(CONSTANS) & original description: none

Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene05121.t1
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os02g39710.1	ATCOL5, COL5,...	transcription factor (BBX-CO)	0.03	OrthoFinder output from all 47 species
Pir_g01588	ATCOL4, COL4	floral promoter *(CONSTANS) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e021565_P001	ATCOL4, COL4,...	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000315	Znf_B-box	3	43
IPR010402	CCT_domain	266	308

External Links

No external refs found!