Solyc01g007150.3.1 (Solyc01g007150.3)


Aliases : Solyc01g007150.3

Description : 31.4 cell.vesicle transport Coatomer, beta subunit


Gene families : OG_01_0003067 (Gene family) Phylogenetic Tree(s): OG0003067_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g007150.3.1
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT4G31480 No alias Coatomer, beta subunit 0.15 Gene family
AT4G31490 No alias Coatomer, beta subunit 0.12 Gene family
Cpa|evm.model.tig00020553.156 No alias 31.4 cell.vesicle transport Coatomer, beta subunit 0.03 Gene family
Cre04.g217921 No alias 31.4 cell.vesicle transport Coatomer, beta subunit 0.06 Gene family
GSVIVT01035511001 No alias 31.4 cell.vesicle transport Coatomer, beta subunit 0.14 Gene family
LOC_Os01g17430 Os01g0281400 31.4 cell.vesicle transport Coatomer, beta subunit 0.09 Gene family
LOC_Os11g07280 Os11g0174000 31.4 cell.vesicle transport Coatomer, beta subunit 0.06 Gene family
MA_10431517g0010 No alias 31.4 cell.vesicle transport Coatomer, beta subunit 0.02 Gene family
MA_230138g0010 No alias 31.4 cell.vesicle transport Coatomer, beta subunit 0.05 Gene family
Smo160340 PACid_15420382 31.4 cell.vesicle transport Coatomer, beta subunit... 0.05 Gene family
Zm00001d004807 GRMZM2G094699 31.4 cell.vesicle transport Coatomer, beta subunit 0.07 Gene family
Zm00001d008218 GRMZM2G378906 31.4 cell.vesicle transport Coatomer, beta subunit 0.07 Gene family
Zm00001d040503 GRMZM2G011101 31.4 cell.vesicle transport Coatomer, beta subunit 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan
BP GO:0006886 intracellular protein transport IEA InterProScan
BP GO:0016192 vesicle-mediated transport IEA InterProScan
CC GO:0030126 COPI vesicle coat IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 20 466
IPR011710 Coatomer_bsu_C 670 808
IPR029446 COPB1_appendage_platform_dom 814 941
No external refs found!