Solyc01g007050.2.1 (Solyc01g007050.2)


Aliases : Solyc01g007050.2

Description : 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity. plant U-box 24 (PUB24)


Gene families : OG_01_0000079 (Gene family) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g007050.2.1
Cluster HCCA cluster: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AT2G35930 PUB23 plant U-box 23 0.02 Gene family
AT3G52450 PUB22 plant U-box 22 0.02 Gene family
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.03 Gene family
GSVIVT01006112001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01011139001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
GSVIVT01011140001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
GSVIVT01026542001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET,... 0.03 Gene family
LOC_Os01g64570 Os01g0865700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
LOC_Os02g33590 Os02g0539200 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
LOC_Os02g33680 Os02g0540700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
LOC_Os02g46500 Os02g0690600 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.01 Gene family
LOC_Os04g34140 Os04g0418500 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
LOC_Os04g49970 Os04g0589700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.05 Gene family
LOC_Os04g58920 Os04g0686000 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
LOC_Os06g06490 Os06g0159900,... 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os08g04470 Os08g0139400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os12g06410 Os12g0161100 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.05 Gene family
MA_10432179g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
MA_10432813g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.01 Gene family
MA_126399g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family
MA_200041g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family
MA_684442g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.01 Gene family
Smo113592 PACid_15417143 No description available 0.02 Gene family
Smo231257 PACid_15415325 No description available 0.04 Gene family
Smo416356 PACid_15422407 No description available 0.02 Gene family
Smo426053 PACid_15404973 No description available 0.02 Gene family
Solyc01g007010.3.1 Solyc01g007010.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
Solyc01g007020.3.1 Solyc01g007020.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
Solyc01g007030.3.1 Solyc01g007030.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
Solyc01g007040.3.1 Solyc01g007040.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Solyc06g074140.1.1 Solyc06g074140.1 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
Solyc11g068920.1.1 Solyc11g068920.1 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Zm00001d001769 GRMZM2G013776 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
Zm00001d002498 GRMZM2G092128 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
Zm00001d016730 GRMZM2G071484 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Zm00001d023480 GRMZM2G031624 35.1 not assigned.no ontology TTF-type zinc finger... 0.04 Gene family
Zm00001d025379 GRMZM2G059042 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET,... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 6 80
No external refs found!