Solyc01g006997.1.1 (Solyc01g006997.1)


Aliases : Solyc01g006997.1

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family Dof-type zinc finger DNA-binding family protein


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g006997.1.1
Cluster HCCA cluster: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT1G21340 No alias Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.04 Gene family
AT4G21050 No alias Dof-type zinc finger domain-containing protein 0.02 Gene family
AT4G38000 DOF4.7 DNA binding with one finger 4.7 0.03 Gene family
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.03 Gene family
GSVIVT01027184001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01034189001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
GSVIVT01038591001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os07g13260 Os07g0236700 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os12g38200 Os12g0569900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os12g39990 Os12g0590700 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_16692g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_74014g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Smo29617 PACid_15412310 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Smo89924 PACid_15413201 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc08g008500.3.1 Solyc08g008500.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d001824 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d034163 GRMZM2G108865 16.5.1.2.3 secondary... 0.03 Gene family
Zm00001d039482 GRMZM2G378490 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.01 Gene family
Zm00001d041549 GRMZM2G176063 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 15 68
No external refs found!